DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003596
GeneBrd8
Synonymsp120
SMAP
Desc.bromodomain containing 8
LocusNM_030147 chr18:34758269-34784464(-)
DB links


Entrez 78656
MGI 1925906
Ensembl ENSMUSG00000003778
Vega OTTMUSG00000017276
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003478
(v2.0)
Brd8NM_001289606,NM_001289607,NM_03014778656
5.000827.192448.407819.321226.183318.96812.97128.9340820.977417.4375
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003596
(v1.0)
Brd878656
MGA0.98236
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003478
(v2.0)
Brd878656
684/4630.0501470/463-0.0943203/4632.3813635/4631.781521/463-2.3506185/463-1.9142
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003478
(v2.0)
Brd878656
333/1740.4215217/1740.2013191/1743.6458594/1743.08448/174-2.249386/174-1.5991
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003478
(v2.0)
Brd878656
76.813816347.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003478
(v2.0)
Brd878656
16.517110116.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003596
(v1.0)
Brd8NM_03014778656
7.523465.7460114.301217.60079.20668
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003596
(v1.0)
Brd8FR071299,NM_03014778656
300.89194.072508.348846.015314.542
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003596
(v1.0)
Brd8NM_03014778656
7.866471.850516.26902
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003596
(v1.0)
Brd8NM_03014778656
7.678455.688326.70043
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003596
(v1.0)
Brd8FR071299,NM_03014778656
548.474483.928
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003596
(v1.0)
Brd8NM_03014778656
7.871041.825167.34881
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003596
(v1.0)
Brd8NM_03014778656
13.240716.994214.4033
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003596
(v1.0)
Brd8FR071299,NM_03014778656
779.965420.661
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003596
(v1.0)
Brd8NM_03014778656
7.9720414.0233
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003596
(v1.0)
Brd8NM_03014778656
5.030795.1915
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003596
(v1.0)
4315C0928A08-3Mm.284142610007E11Rik78656
NAP047003-1TC8749922.19162.20091.76882.04722.44482.38852.635
0003596
(v1.0)
4877G0110F04-3Mm.284142610007E11Rik78656
U038309NAP056589-12610007E11Rik;Brd8;TC874992,TC874989,TC874988U,F,23.05062.7622.96033.25273.27233.02283.2227
0003596
(v1.0)
17084K0532G05-3Mm.284142610007E11Rik78656
U038309NAP094444-0012610007E11Rik;Brd8;TC874990U,F,22.6652.57892.71142.61642.6322.67982.586
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003596
(v1.0)
1451137_a_atMm.45602Brd8NM_030147.278656
66.02584.975145.325112.989.175
0003596
(v1.0)
1452350_atMm.45602Brd8NM_030147.278656
0050.85081.925
0003596
(v1.0)
1456351_atMm.45602Brd8NM_030147.278656
160.7198.87500119.6
0003596
(v1.0)
1429526_atMm.45602Brd8NM_030147.278656
000444.375370.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003596
(v1.0)
A_51_P194984Brd8AK03016778656
11P1.0930.65P
0003596
(v1.0)
A_52_P676492Brd8NM_03014778656
11P1.0210.918P
Proteome N/A