DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003597
GeneBrd9
Synonyms
Desc.bromodomain containing 9
LocusNM_001024508 chr13:74075286-74098343(+)
DB links


Entrez 105246
MGI 2145317
Ensembl ENSMUSG00000057649
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003479
(v2.0)
Brd9NM_001024508105246
7.9631130.519232.144270.67681.33949.2990318.862630.529176.06929.001
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003597
(v1.0)
Brd9105246
Major ZGA0.98984
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003479
(v2.0)
Brd9105246
752/4650.1803503/465-0.0029447/4653.51021081/4652.541930/465-1.862179/465-1.9676
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003479
(v2.0)
Brd9105246
395/1940.5108239/1940.1839409/1944.5931941/1943.592419/194-1.2508104/194-1.4854
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003479
(v2.0)
Brd9105246
86.469615256.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003479
(v2.0)
Brd9105246
28.81059032.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
31.721722.338752.615356.409313.2771
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003597
(v1.0)
Brd9FR228617,NM_001024508105246
426.143372.188678.401833.997106.744
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
33.16792.9121924.372
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
32.375222.114422.6407
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003597
(v1.0)
Brd9FR228617,NM_001024508105246
683.413456.431
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
33.18722.8723124.8315
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
48.713654.465552.6005
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003597
(v1.0)
Brd9FR228617,NM_001024508105246
672.971565.19
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003597
(v1.0)
Brd9NM_001024508105246
14.242110.9729
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003597
(v1.0)
Brd9NM_001024508105246
14.48513.355
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003597
(v1.0)
4568C0942A02-3Mm.222487AL022779105246
U015007NAP099944-001AL022779;TC920654U,F,23.13682.95342.91913.54443.23943.24523.0883
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003597
(v1.0)
1456018_atMm.278509Brd9NM_001024508.2105246
1186.3694.6251131.4252200.21561.825
Agilent44K N/A
Proteome N/A