DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003602
GeneBri3
SynonymsI3 protein
Desc.brain protein I3
LocusNM_001163709 chr5:145005306-145025442(+)
NM_018772 chr5:145016094-145025442(+)
DB links


Entrez 55950
MGI 1933174
Ensembl ENSMUSG00000047843
Vega OTTMUSG00000025579
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003484
(v2.0)
Bri3NM_001163709,NM_01877255950
110.942104.372196.64859.948914.523845.982122.9925271.26822.866653.861
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003602
(v1.0)
Bri355950
Minor ZGA0.97976
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003484
(v2.0)
Bri355950
614/464-0.1085374/464-0.426247/4640.2908195/4640.080297/464-0.1984695/464-0.0164
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003484
(v2.0)
Bri355950
270/204-0.1079161/204-0.455132/2040.8897147/2040.850636/204-0.4343310/2040.0043
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003484
(v2.0)
Bri355950
86.939910483.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003484
(v2.0)
Bri355950
25.34643279.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
108.54135.72344.704510.037115.7484
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
52.224254.926414.75843.469345.058
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
113.48840.5743148.077
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
110.776134.36201.049
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
55.7693144.346
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
113.55440.0185220.503
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
41.38949.6912615.8545
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
3.30775.02018
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
215.25656.6789
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003602
(v1.0)
Bri3NM_001163709,NM_01877255950
80.556192.1821
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003602
(v1.0)
14140J0414H07-3Mm.38011Bri355950
NAP098745-001Bri3TC864432P286624.60274.63073.78523.70573.57563.8653.9195
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003602
(v1.0)
1416924_atMm.38011Bri3NM_018772.4,NM_001163709.155950
273.4525.7552.70246.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003602
(v1.0)
A_51_P126643Bri3NM_01877255950
11P0.6080.126P
0003602
(v1.0)
A_52_P225249Bri3NM_01877255950
11P1.0290.825P
Proteome N/A