DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003605
GeneBrip1
SynonymsBACH1
Desc.BRCA1 interacting protein C-terminal helicase 1
LocusNM_178309 chr11:85871638-86014695(-)
DB links


Entrez 237911
MGI 2442836
Ensembl ENSMUSG00000034329
Vega OTTMUSG00000001045
Featureprotein-coding
GO(BP)
  •   5 Terms
      nucleobase-containing compound metabolic process (GO:0006139)
      DNA repair (GO:0006281)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      response to DNA damage stimulus (GO:0006974)
      negative regulation of cell proliferation (GO:0008285)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003490
(v2.0)
Brip1NM_178309237911
0.40011636.913731.14988.060676.150131.848465.2062522.82896.217072.14053
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003605
(v1.0)
Brip1237911
Maternal RNA0.99904
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003490
(v2.0)
Brip1237911
630/446-0.0145382/446-0.3388168/4462.1623451/4461.342461/446-0.8023263/446-1.3563
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003490
(v2.0)
Brip1237911
263/1680.133150/168-0.2779154/1683.3843401/1682.568625/168-0.6694139/168-0.8656
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003490
(v2.0)
Brip1237911
63.768416239.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003490
(v2.0)
Brip1237911
12.654710711.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003605
(v1.0)
Brip1NM_178309237911
38.356321.52776.000764.264823.6709
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003605
(v1.0)
Brip1NM_178309237911
261.645104.70852.470336.740523.7339
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
40.10510.14632723.4872
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
39.146521.311616.9147
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
145.01121.555
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
40.12840.14432218.5515
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
5.555774.117864.30834
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
28.080433.6801
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003605
(v1.0)
Brip1NM_178309237911
33.52042.82087
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003605
(v1.0)
Brip1NM_178309237911
3.857897.42449
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003605
(v1.0)
10736H3102H05-3Mm.1615278030460J03237911
U033218NAP094553-001TC810732U,F2.81112.8492.85142.79732.6212.65142.6453
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003605
(v1.0)
1458427_atMm.186143Brip1NM_178309.2237911
735.225410.225163.850175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003605
(v1.0)
A_51_P295206Brip1NM_178309237911
11P0.6910.178P
Proteome N/A