DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003611
GeneBrpf1
Synonyms
Desc.bromodomain and PHD finger containing, 1
LocusNM_030178 chr6:113257191-113274698(+)
DB links


Entrez 78783
MGI 1926033
Ensembl ENSMUSG00000001632
Vega OTTMUSG00000022740
Featureprotein-coding
GO(BP)
  •   2 Terms
      histone H3 acetylation (GO:0043966)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003496
(v2.0)
Brpf1NM_001282126,NM_001282127,NM_001282128,NM_03017878783
9.506593.567465.0635322.33125.022410.30226.902684.8507122.049.53219
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003611
(v1.0)
Brpf178783
Major ZGA0.98478
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003496
(v2.0)
Brpf178783
733/4210.2866416/421-0.1331464/4213.7035992/4212.560741/421-1.2818269/421-1.2409
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003496
(v2.0)
Brpf178783
351/1570.6446203/1570.253451/1575.0192940/1573.89187/157-2.274659/157-1.9839
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003496
(v2.0)
Brpf178783
79.110318442.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003496
(v2.0)
Brpf178783
20.888212416.85
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
3.812523.5571716.902417.78115.0387
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003611
(v1.0)
Brpf1FR032854,NM_03017878783
5.0054513.922461.296270.31479.54929
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
3.986343.572123.88095
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
3.891063.521453.72733
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003611
(v1.0)
Brpf1FR032854,NM_03017878783
24.909218.4128
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
3.988653.52324.08801
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
15.64917.168415.6449
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003611
(v1.0)
Brpf1FR032854,NM_03017878783
36.284830.7109
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003611
(v1.0)
Brpf1NM_03017878783
1.722624.76021
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003611
(v1.0)
Brpf1NM_03017878783
0.123830.600595
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003611
(v1.0)
12631H3149A02-3Mm.807734833438B11Rik78783
U007266NAP004161-0014833438B11Rik;TC930890,TC930888,TC930887,TC930886Q9CTY1U,F,23.43343.37953.44093.48323.54293.48813.496
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003611
(v1.0)
1460402_atMm.356059Brpf1NM_030178.178783
111.50278.750160.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003611
(v1.0)
A_51_P271354Brpf1NM_03017878783
11P0.620.134P
Proteome N/A