DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003616
GeneBrwd1
SynonymsG1-403-16
repro5
Wdr9
Desc.bromodomain and WD repeat domain containing 1
LocusNM_145125 chr16:96213699-96304035(-)
NM_001103179 chr16:96223155-96304035(-)
NM_176928 chr16:96288275-96304035(-)
DB links


Entrez 93871
MGI 1890651
Ensembl ENSMUSG00000022914
Vega OTTMUSG00000020395
Featureprotein-coding
GO(BP)
  •   5 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003501
(v2.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
8.5390887.9771110.72979.812592.823426.128932.567397.449683.133820.6695
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003616
(v1.0)
Brwd193871
1-Cell Transient0.93325
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003501
(v2.0)
Brwd193871
947/5310.3213533/531-0.1106762/5314.09142097/5313.306771/531-0.8361477/531-0.7522
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003501
(v2.0)
Brwd193871
587/2041.0084335/2040.597703/2045.30471764/2044.426625/204-0.9433176/204-0.807
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003501
(v2.0)
Brwd193871
80.474315651.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003501
(v2.0)
Brwd193871
21.75739522.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
91.434776.661859.375264.332822.7795
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003616
(v1.0)
Brwd1FR121660,FR186235,NM_001103179,NM_145125,NM_17692893871
251.097148.247196.954207.94876.6402
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
95.60333.1228683.6397
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
93.318375.89272.1686
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003616
(v1.0)
Brwd1FR121660,FR186235,NM_001103179,NM_145125,NM_17692893871
1293.041291.97
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
95.65893.0800979.1521
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
54.972262.115957.3939
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
178.166139.885
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
90.794530.6744
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003616
(v1.0)
Brwd1NM_001103179,NM_145125,NM_17692893871
6.751588.1497
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003616
(v1.0)
5559H3002G10-3Mm.131039Wdr993871
TC909862,TC909861U,F,23.91343.99053.40663.48683.64313.56733.5428
0003616
(v1.0)
10169H3092A08-3Mm.131039Wdr993871
TC909861U,F,22.96442.89652.69122.70542.53162.53792.5729
0003616
(v1.0)
20873L0817C10-3Wdr993871
TC909862,TC909861U,F,22.89342.812.06252.37981.98932.36332.432
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003616
(v1.0)
1427322_atMm.240871Brwd1NM_145125.3,NM_001103179.1,NM_176928.193871
324.2339221.9190.5141.1
0003616
(v1.0)
1433955_atMm.240871Brwd1NM_145125.3,NM_001103179.1,NM_176928.193871
87.65145.20281.05469.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003616
(v1.0)
A_51_P181538Brwd1NM_14512593871
11P0.7760.264P
0003616
(v1.0)
A_52_P223521Brwd1AK08692793871
11P1.2690.261P
0003616
(v1.0)
A_52_P301223Brwd1BC05661893871
11P1.0760.641P
0003616
(v1.0)
A_52_P609448Brwd1NM_14512593871
11P0.4250.101P
Proteome N/A