DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003618
GeneBscl2
SynonymsGng3lg
seipin
Desc.Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
LocusNM_001136064 chr19:8911957-8923173(+)
NM_008144 chr19:8913818-8923173(+)
DB links


Entrez 14705
MGI 1298392
Ensembl ENSMUSG00000071657
Vega OTTMUSG00000034930
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003503
(v2.0)
Bscl2NM_001136064,NM_001290823,NM_00814414705
84.039297.286855.94869.809416.117812.492710.368763.22499.5973516.5961
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003618
(v1.0)
Bscl214705
Maternal RNA0.96321
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003503
(v2.0)
Bscl214705
665/480-0.0424403/480-0.3676149/4801.887408/4801.092810/480-3.402195/480-2.9166
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003503
(v2.0)
Bscl214705
285/1940.0419159/194-0.4008110/1942.708284/1941.86763/194-3.572836/194-2.9773
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003503
(v2.0)
Bscl214705
58.89214341.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003503
(v2.0)
Bscl214705
16.34497123.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
79.677830.69635.812173.234916.15065
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
1191.75415.54966.925855.810181.5763
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
83.310524.152233.4903
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
81.319330.388136.9423
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
317.507285.988
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
83.358923.821440.5171
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
5.381173.123435.36414
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
52.827171.3242
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
19.77065.66986
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003618
(v1.0)
Bscl2NM_001136064,NM_00814414705
176.941112.336
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003618
(v1.0)
13022H3156H03-3Mm.15985Gng3lg14705
U019129NAP006523-001Gng3lg;TC857771,TC857770,TC857764,TC857752Q9JMF1U,F,23.22683.15522.80432.78512.41112.44462.3449
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003618
(v1.0)
1420632_a_atMm.345134Bscl2NM_001136064.2,NM_008144.414705
460.675591.7000
0003618
(v1.0)
1437345_a_atMm.345134Bscl2NM_001136064.2,NM_008144.414705
2107.1252409.3751174.650119.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003618
(v1.0)
A_51_P196526Bscl2NM_00814414705
11P1.240.302P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003618
(v1.0)
Bscl214705
331333