DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003629
GeneBtaf1
Synonyms
Desc.BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
LocusNM_001080706 chr19:37000569-37088547(+)
DB links


Entrez 107182
MGI 2147538
Ensembl ENSMUSG00000040565
Vega OTTMUSG00000042429
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003514
(v2.0)
Btaf1NM_001080706107182
4.8398.1407910.880923.526821.23456.224857.06028.4116825.67885.6642
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003629
(v1.0)
Btaf1107182
Major ZGA0.98448
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003514
(v2.0)
Btaf1107182
615/440-0.0297409/440-0.2211150/4402.0189416/4401.245636/440-1.5277265/440-1.3259
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003514
(v2.0)
Btaf1107182
360/2000.3337220/2000.0212143/2003.0422398/2002.309613/200-1.8084104/200-1.5291
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003514
(v2.0)
Btaf1107182
43.650912834.1
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003514
(v2.0)
Btaf1107182
10.21639211.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
8.456317.5256117.525114.76944.95839
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
118.746101.992186.262169.93450.3948
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
8.841851.769678.2106
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
8.630527.450046.23343
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
194.509148.257
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
8.846991.745436.83662
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
16.225514.260417.734
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
167.218188.373
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003629
(v1.0)
Btaf1NM_001080706107182
9.155620.9522
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003629
(v1.0)
Btaf1NM_001080706107182
3.428454.89073
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003629
(v1.0)
3007C0501C12-3Mm.146462AI447930107182
AI4479302.89032.94953.34383.34743.21293.19573.3453
0003629
(v1.0)
3572C0821B11-3Mm.146462AI447930107182
U019404NAP003337-001TC864813U,F,23.54683.43482.92613.17712.73132.80742.8169
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003629
(v1.0)
1435248_a_atMm.295062Btaf1NM_001080706.1107182
208.1750786.151076.0251309.2
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003629
(v1.0)
Btaf1107182
211221