DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003684
GeneC130026I21Rik
SynonymsOTTMUSG00000029174
Desc.RIKEN cDNA C130026I21 gene
LocusNM_175219 chr1:85242919-85267141(-)
NM_001037909 chr1:85242919-85267141(-)
DB links


Entrez 620078
MGI 3612702
Ensembl ENSMUSG00000052477
Vega OTTMUSG00000029174
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003571
(v2.0)
C130026I21RikNM_001037909,NM_175219620078
0.2368414.572669.418759.2359125.5310.1360030.0294558.68895121.9330.818017
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003684
(v1.0)
C130026I21Rik620078
MGA0.99901
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003571
(v2.0)
C130026I21Rik620078
452/339-0.0975498/3390.437510/339-1.3954180/3390.415333/339-1.2775215/339-1.2504
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003571
(v2.0)
C130026I21Rik620078
155/109-0.0048169/1090.51255/109-0.734475/1090.778111/109-1.179581/109-1.0141
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003571
(v2.0)
C130026I21Rik620078
26.82123968.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003571
(v2.0)
C130026I21Rik620078
12.07271963.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
4.74976.5348344.059587.18940.0189568
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
1.513832.0860310.581422.86020
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
4.966250.08661837.12964
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
4.847556.469216.42144
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
2.118322.22542
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
4.969140.08543197.04282
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
40.792284.184884.1182
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
22.613221.3066
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
5.1724264.4262
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003684
(v1.0)
C130026I21RikNM_001037909,NM_175219620078
1.180881.02619
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003684
(v1.0)
1425078_x_atMm.426537~Mm.429811LOC100041885~C130026I21Rik~100041885
620078
135.52552.125876.825952.82533.35
Agilent44K N/A
Proteome N/A