DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003723
GeneC230052I12Rik
Synonyms
Desc.RIKEN cDNA C230052I12 gene
LocusNM_178643 chr7:36177171-36181786(-)
DB links


Entrez 101831
MGI 2142208
Ensembl ENSMUSG00000030493
Vega OTTMUSG00000024888
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003614
(v2.0)
C230052I12RikNM_178643101831
4.592449.916979.2622103.65262.28322.826453.5881311.151665.12853.58811
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003723
(v1.0)
C230052I12Rik101831
2-Cell Transient0.97988
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003614
(v2.0)
C230052I12Rik101831
758/5160.0419377/516-0.5677107/5161.3112255/5160.31324/516-2.3212134/516-2.5311
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003614
(v2.0)
C230052I12Rik101831
302/220-0.0555157/220-0.599694/2202.3121225/2201.35375/220-3.165742/220-2.9438
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003614
(v2.0)
C230052I12Rik101831
100.327317258.33
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003614
(v2.0)
C230052I12Rik101831
19.59378223.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
10.31396.4102377.223643.19872.56517
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
23.052418.5905196.311110.6417.6001
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
10.78411.67956.9937
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
10.52646.345868.26587
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
7.059589.29338
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
10.79041.65659.06573
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
71.49741.710145.1982
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
80.546984.8211
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003723
(v1.0)
C230052I12RikNM_178643101831
12.801578.5023
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003723
(v1.0)
C230052I12RikNM_178643101831
59.0986110.082
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003723
(v1.0)
10950H3105H11-3Mm.206921AW124591101831
U028437NAP121022-001TC936334,TC936332U,F,23.00993.13493.82464.09943.44753.61623.4121
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003723
(v1.0)
1454779_s_atMm.389855C230052I12RikNM_178643.5101831
1190197.3500
Agilent44K N/A
Proteome N/A