DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003729
GeneC2cd3
Synonyms
Desc.C2 calcium-dependent domain containing 3
LocusNM_001017985 chr7:107520743-107618668(+)
DB links


Entrez 277939
MGI 2142166
Ensembl ENSMUSG00000047248
Vega OTTMUSG00000031837
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003619
(v2.0)
C2cd3NM_001017985277939
4.7847921.385728.657617.48395.318822.001615.299728.88225.846982.0616
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003729
(v1.0)
C2cd3277939
Maternal RNA0.94813
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003619
(v2.0)
C2cd3277939
692/3570.441569/3570.555988/3575.02293773/3574.723233/357-1.3513147/357-1.8687
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003619
(v2.0)
C2cd3277939
357/1500.7343271/1500.7333801/1505.90752485/1505.358120/150-0.818273/150-1.6183
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003619
(v2.0)
C2cd3277939
46.24412038.54
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003619
(v2.0)
C2cd3277939
14.26878716.4
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
22.242619.79213.00153.678023.71281
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
121.11874.32776.275214.504417.7618
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
23.25671.7498521.5935
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
22.700819.593321.4403
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
48.5246111.068
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
23.27021.7258823.515
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
12.03743.551274.0674
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
22.328826.69
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003729
(v1.0)
C2cd3NM_001017985277939
9.102778.66004
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003729
(v1.0)
C2cd3NM_001017985277939
15.935115.2016
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003729
(v1.0)
1454977_atMm.276374C2cd3NM_001017985.2277939
153.15293.15208.37500
Agilent44K N/A
Proteome N/A