DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003747
GeneC330027C09Rik
SynonymsCip2a
Desc.RIKEN cDNA C330027C09 gene
LocusNM_172616 chr16:48994301-49019818(+)
DB links


Entrez 224171
MGI 2146335
Ensembl ENSMUSG00000033031
Vega OTTMUSG00000028726
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003636
(v2.0)
C330027C09RikNM_172616224171
4.0197951.786158.424889.31386.305313.600126.773630.724572.539214.4983
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003747
(v1.0)
C330027C09Rik224171
Major ZGA0.98789
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003636
(v2.0)
C330027C09Rik224171
681/3690.3703508/3690.3442154/3692.303385/3691.386546/369-0.9313201/369-1.4688
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003636
(v2.0)
C330027C09Rik224171
378/1770.5791237/1770.3034153/1773.3046364/1772.355120/177-1.051112/177-1.2483
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003636
(v2.0)
C330027C09Rik224171
58.135212446.88
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003636
(v2.0)
C330027C09Rik224171
24.94128928.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
53.812440.323166.492259.768719.0208
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
361.251225.928392.765364.282130.59
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
56.26581.4700843.9934
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
54.92139.918222.7439
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
1003.07517.432
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
56.29851.4499424.9448
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
61.561457.709150.0534
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
434.645306.053
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003747
(v1.0)
C330027C09RikNM_172616224171
28.062827.2884
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003747
(v1.0)
C330027C09RikNM_172616224171
4.802549.03819
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003747
(v1.0)
9102H3076E02-3Mm.24491C330027C09224171
U017188NAP099691-001TC810308,TC810307U3.75963.79573.5833.84353.44933.48893.3627
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003747
(v1.0)
A_51_P499233C330027C09RikNM_172616224171
11P1.1660.368P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003747
(v1.0)
C330027C09Rik224171
371371