DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003771
GeneC78339
Synonyms
Desc.expressed sequence C78339
LocusNM_001033192 chr13:46764891-46771142(+)
DB links


Entrez 97863
MGI 2145496
Ensembl ENSMUSG00000069237
Vega OTTMUSG00000027736
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003661
(v2.0)
C78339NM_00103319297863
28.099874.293123.58321.740728.69227.1989543.167722.311922.36915.64697
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003771
(v1.0)
C7833997863
Maternal RNA0.99099
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003661
(v2.0)
C7833997863
759/3960.4249539/3960.3278472/3963.81391419/3963.164599/3960.0572779/3960.3759
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003661
(v2.0)
C7833997863
440/1750.8138270/1750.507445/1754.8541204/1754.094318/175-1.1794208/175-0.3479
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003661
(v2.0)
C7833997863
61.92329763.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003661
(v2.0)
C7833997863
16.77255033.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003771
(v1.0)
C78339NM_00103319297863
77.165416.214916.151720.014829.5585
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003771
(v1.0)
C78339NM_00103319297863
225.43945.565847.036555.167477.977
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
80.683510.276417.6908
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
78.755116.052116.5702
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
46.865635.1008
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
80.730410.135618.1736
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
14.953919.325115.5455
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
54.83945.2229
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003771
(v1.0)
C78339NM_00103319297863
23.22991.09607
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003771
(v1.0)
C78339NM_00103319297863
0.1776680.366687
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003771
(v1.0)
1433475_a_atMm.275934C78339NM_001033192.297863
2269.33833.7751632.525903772.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003771
(v1.0)
A_51_P155550C78339AK09037197863
11P1.1090.489P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003771
(v1.0)
C7833997863
100200