DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003779
GeneC87977
Synonyms
Desc.expressed sequence C87977
LocusNM_001177542 chr4:143796665-143802920(-)
DB links


Entrez 97187
MGI 2140708
Ensembl ENSMUSG00000046262
Vega OTTMUSG00000010543
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003668
(v2.0)
C87977NM_00117754297187
0341.635338.19419.12276.875060.04927930.120103283.72513.82210.0179881
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003779
(v1.0)
C8797797187
Maternal RNA0.99908
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003668
(v2.0)
C8797797187
206/1210.2529212/1210.68830/121-3.455748/121-0.00265/121-2.324964/121-1.4963
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003668
(v2.0)
C8797797187
95/550.271276/550.34480/55-2.467917/55-0.34472/55-2.243933/55-1.2976
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003668
(v2.0)
C8797797187
25.67923377.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003668
(v2.0)
C8797797187
5.6547962.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003779
(v1.0)
C87977NM_00117754297187
354.953233.67814.2314.74610.0882851
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003779
(v1.0)
C87977NM_00117754297187
312.068168.68710.78233.706340.032187
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
371.1360254.948
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
362.266231.331210.364
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
171.31158.006
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
371.3520230.72
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
13.17574.582559.68983
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
3.666428.45105
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003779
(v1.0)
C87977NM_00117754297187
607.51854.9805
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003779
(v1.0)
C87977NM_00117754297187
64.228539.0295
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003779
(v1.0)
1456558_s_atMm.422698C87977NM_001177542.197187
4373.85757.3753792.75145.6750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003779
(v1.0)
A_52_P387548C87977BC09489597187
11P0.3740.0643P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003779
(v1.0)
C8797797187
2.5112.56304