DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003790
GeneCab39
Synonyms39kDa
MO25alpha
Desc.calcium binding protein 39
LocusNM_133781 chr1:87690022-87748152(+)
DB links


Entrez 12283
MGI 107438
Ensembl ENSMUSG00000036707
Vega OTTMUSG00000021589
Featureprotein-coding
GO(BP)
  •   1 Terms
      positive regulation of protein kinase activity (GO:0045860)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003679
(v2.0)
Cab39NM_13378112283
47.326830.520363.9236177.478261.69432.948622.568549.6832214.8333.47
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003790
(v1.0)
Cab3912283
Major ZGA0.97931
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003679
(v2.0)
Cab3912283
724/4060.321518/4060.2347536/4063.9621277/4062.976773/406-0.4128616/4060.0021
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003679
(v2.0)
Cab3912283
367/1480.7932263/1480.7095524/1485.31411182/1484.305722/148-0.6681161/148-0.4741
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003679
(v2.0)
Cab3912283
67.296417039.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003679
(v2.0)
Cab3912283
18.549311815.72
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003790
(v1.0)
Cab39NM_13378112283
31.718544.2275132.152181.40715.9157
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003790
(v1.0)
Cab39NM_13378112283
39.517548.4729151.619209.55519.1395
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
33.164617.307948.2532
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
32.37243.783436.7903
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
56.126847.785
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
33.183917.070840.3503
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
122.352175.155148.196
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
207.292176.377
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003790
(v1.0)
Cab39NM_13378112283
18.16837.2165
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003790
(v1.0)
Cab39NM_13378112283
13.678416.1276
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003790
(v1.0)
11885H3126E05-3Mm.21684Cab3912283
U000523NAP003055-001Cab39;TC868777Q06138U,F,23.5923.40733.40523.52034.20313.76024.0735
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003790
(v1.0)
1418432_atMm.26135Cab39NM_133781.412283
119.175202.925407.65769.45172.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003790
(v1.0)
A_51_P230934Cab39NM_13378112283
11P0.1760.0366P
0003790
(v1.0)
A_52_P299746Cab39NM_13378112283
11P0.01680.0167P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003790
(v1.0)
Cab3912283
230340