DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003890
GeneCap1
Synonyms
Desc.CAP, adenylate cyclase-associated protein 1 (yeast)
LocusNM_007598 chr4:122536471-122563124(-)
DB links


Entrez 12331
MGI 88262
Ensembl ENSMUSG00000028656
Vega OTTMUSG00000008872
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003779
(v2.0)
Cap1NM_00759812331
159.6433.529144.3536811.165619.881268.773828.62554.3174319.320573.3397
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003890
(v1.0)
Cap112331
MGA0.99464
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003779
(v2.0)
Cap112331
580/465-0.1935406/465-0.3112175/4652.1622527/4651.506831/465-1.8162203/465-1.7875
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003779
(v2.0)
Cap112331
300/227-0.11152/227-0.6909164/2273.0657475/2272.38361/227-4.79547/227-2.8319
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003779
(v2.0)
Cap112331
41.90713131.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003779
(v2.0)
Cap112331
7.768928.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003890
(v1.0)
Cap1NM_00759812331
3.671493.042428.3338513.755519.9998
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003890
(v1.0)
Cap1NM_00759812331
7.5680113.209544.97757.415886.2701
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
3.8388858.3833.31935
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
3.747133.011873.1891
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
9.99696.79912
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
3.8411157.58333.49769
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
7.7158513.281513.3711
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
52.453542.8457
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003890
(v1.0)
Cap1NM_00759812331
2.2015412.0377
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003890
(v1.0)
Cap1NM_00759812331
1.433860
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003890
(v1.0)
1417461_atMm.8687Cap1NM_007598.312331
000226.61127.075
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003890
(v1.0)
Cap112331
912224322