DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003894
GeneCapn10
SynonymsCapn8
Desc.calpain 10
LocusNM_011796 chr1:94830985-94844525(+)
DB links


Entrez 23830
MGI 1344392
Ensembl ENSMUSG00000026270
Vega OTTMUSG00000026368
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003783
(v2.0)
Capn10NM_01179623830
6.377216.833839.715266.268525.390698.511813.9771310.15425.349089.32571
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003894
(v1.0)
Capn1023830
Minor ZGA0.88724
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003783
(v2.0)
Capn1023830
754/561-0.0861430/561-0.4988145/5611.6282354/5610.664671/561-0.9148652/561-0.3817
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003783
(v2.0)
Capn1023830
301/224-0.0862180/224-0.4295136/2242.8156297/2241.72716/224-1.688798/224-1.7763
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003783
(v2.0)
Capn1023830
67.953314447.19
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003783
(v2.0)
Capn1023830
15.52398717.84
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003894
(v1.0)
Capn10NM_01179623830
7.105866.76944.678483.733912.82216
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003894
(v1.0)
Capn10NM_01179623830
45.772735.194423.147220.670120.5576
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
7.429832.332217.38556
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
7.252256.701437.53087
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
42.017551.3419
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
7.434142.300278.2596
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
4.331553.605243.70811
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
25.369440.2581
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003894
(v1.0)
Capn10NM_01179623830
0.4126010.510589
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003894
(v1.0)
Capn10NM_01179623830
12.25286.26151
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003894
(v1.0)
15828K0300B07-3Mm.29544Capn1023830
U000623NAP004032-001Capn10;TC920032,TC920030Q9ESK3U,F,23.68393.52073.33753.57833.30053.51093.618
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003894
(v1.0)
1452959_a_atMm.294315Capn10NM_011796.223830
71.9597.2547.925051.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003894
(v1.0)
A_51_P370252Capn10NM_01179623830
11P0.9190.553P
Proteome N/A