DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003902
GeneCapn7
SynonymsPalBH
Desc.calpain 7
LocusNM_009796 chr14:32149910-32185169(+)
DB links


Entrez 12339
MGI 1338030
Ensembl ENSMUSG00000021893
Vega OTTMUSG00000027910
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003792
(v2.0)
Capn7NM_00979612339
11.701137.812539.114122.012210.36347.4692522.433123.602110.2336.31647
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003902
(v1.0)
Capn712339
Maternal RNA0.89259
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003792
(v2.0)
Capn712339
628/3410.3672456/3410.3023382/3413.71821219/3413.159759/341-0.4665462/341-0.1607
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003792
(v2.0)
Capn712339
354/1880.3983225/1880.1423380/1884.52991189/1883.974318/188-1.2805156/188-0.8622
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003792
(v2.0)
Capn712339
41.759711636
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003792
(v2.0)
Capn712339
12.6288614.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003902
(v1.0)
Capn7NM_00979612339
39.294926.973216.3887.1667115.8227
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003902
(v1.0)
Capn7NM_00979612339
637.668311.159153.9199.1804226.562
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
41.08644.279229.4284
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
40.104426.702417.4629
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
282.323138.95
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
41.11024.2205919.1527
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
15.17276.919757.10501
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
59.078257.492
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003902
(v1.0)
Capn7NM_00979612339
69.12129.98317
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003902
(v1.0)
Capn7NM_00979612339
20.169638.7807
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003902
(v1.0)
8274H3063A03-3Mm.24778Capn712339
U043389NAP033472-1Capn7;TC887150Q9R1S8U,F4.16324.02063.1313.05262.9263.07353.1792
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003902
(v1.0)
1423096_atMm.201535Capn7NM_009796.212339
371.4640247.07538.5109.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003902
(v1.0)
A_51_P184100Capn7NM_00979612339
11P1.2140.392P
0003902
(v1.0)
A_52_P623782Capn7NM_00979612339
11P0.5670.111P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003902
(v1.0)
Capn712339
110110