DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003905
GeneCapns1
SynonymsCapa-4
Capa4
Capn4
D7Ertd146e
Descriptioncalpain, small subunit 1
LocusNM_009795 UCSC: chr7:30971961-30980067(-) OLP: chr7:30971961-30980067(-)
DB links


Entrez 12336
MGI 88266
Ensembl ENSMUSG00000001794
Vega OTTMUSG00000022203
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2003795 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003905
(v1.0)
Capns1NM_00979512336
37.473423.40383.192797.1839183.2372
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003905
(v1.0)
Capns1NM_00979512336
39.1819113.10425.534
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003905
(v1.0)
Capns1NM_00979512336
38.245423.168832.447
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003905
(v1.0)
Capns1NM_00979512336
39.2046111.55535.5868
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003905
(v1.0)
Capns1NM_00979512336
2.956036.936357.34626
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003905
(v1.0)
Capns1NM_00979512336
39.577111.8157
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003905
(v1.0)
Capns1NM_00979512336
1.023460.924134
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003905
(v1.0)
19576L0282E05-3Mm.6534Capns112336
U028370NAP098407-001Capns1;TC886353,TC886351O88456U2.97243.05863.11813.04063.0913.12323.1658
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003905
(v1.0)
1426400_a_atMm.439782Capns1NM_009795.312336
182.225204.85116.175138.15549.125
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003905
(v1.0)
Capns112336
0.670.6710.670.673