DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003908
GeneCaprin2
SynonymsC1qdc1
Eeg1
RNG140
Desc.caprin family member 2
LocusNM_181541 chr6:148791034-148844648(-)
DB links


Entrez 232560
MGI 2448541
Ensembl ENSMUSG00000030309
Vega OTTMUSG00000023388
Featureprotein-coding
GO(BP)
  •   10 Terms
      negative regulation of translation (GO:0017148)
      cell differentiation (GO:0030154)
      negative regulation of cell growth (GO:0030308)
      positive regulation of protein binding (GO:0032092)
      positive regulation of peptidyl-serine phosphorylation (GO:0033138)
      regulation of growth (GO:0040008)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of dendrite morphogenesis (GO:0050775)
      positive regulation of dendritic spine morphogenesis (GO:0061003)
      positive regulation of canonical Wnt receptor signaling pathway (GO:0090263)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003798
(v2.0)
Caprin2NM_181541232560
0.50411855.83676.317718.17579.027748.893455.7699676.032310.55647.4782
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003908
(v1.0)
Caprin2232560
Minor ZGA0.97198
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003798
(v2.0)
Caprin2232560
527/3090.2566437/3090.382797/3091.8887224/3090.8619115/3090.625611/3090.3831
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003798
(v2.0)
Caprin2232560
301/1680.3267203/1680.155992/1682.6473209/1681.631837/168-0.1219194/168-0.3891
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003798
(v2.0)
Caprin2232560
27.43811224.5
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003798
(v2.0)
Caprin2232560
12.6658315.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
58.037352.856213.53726.259494.01755
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003908
(v1.0)
Caprin2FR197935,FR379062,NM_181541232560
74.598765.458818.25299.09887.55295
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
60.68340.18436157.6672
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
59.23352.325456.2618
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003908
(v1.0)
Caprin2FR197935,FR379062,NM_181541232560
279.523383.755
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
60.71860.18183661.706
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
12.53336.043797.3355
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003908
(v1.0)
Caprin2FR197935,FR379062,NM_181541232560
8.68989.72577
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003908
(v1.0)
Caprin2NM_181541232560
33.580617.5517
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003908
(v1.0)
Caprin2NM_181541232560
9.151537.25958
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003908
(v1.0)
2304C0309H03-3Mm.3419LOC232560232560
U028056NAP003745-002TC870789U,F,23.28483.58143.30483.5852.4522.73452.7767
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003908
(v1.0)
1427944_atMm.150568Caprin2NM_181541.3232560
389.275363.825219.57545.536.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003908
(v1.0)
A_52_P204944C1qdc1XM_132976232560
11P0.6070.133P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003908
(v1.0)
Caprin2232560
16102010