DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003911
GeneCapza1
SynonymsCappa1
Desc.capping protein (actin filament) muscle Z-line, alpha 1
LocusNM_009797 chr3:104625703-104667423(-)
DB links


Entrez 12340
MGI 106227
Ensembl ENSMUSG00000070372
Vega OTTMUSG00000022229
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003801
(v2.0)
Capza1NM_00979712340
39.16819.9069721.82729.1312513.723851.92818.671515.330913.057749.9663
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003911
(v1.0)
Capza112340
1-Cell Transient0.93851
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003801
(v2.0)
Capza112340
626/3640.2687464/3640.2334289/3643.2259566/3641.960810/364-3.00797/364-2.4888
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003801
(v2.0)
Capza112340
331/1790.3722200/1790.0436280/1794.157523/1792.86083/179-3.459241/179-2.6813
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003801
(v2.0)
Capza112340
42.860914928.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003801
(v2.0)
Capza112340
15.533512012.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003911
(v1.0)
Capza1NM_00979712340
10.295615.09016.799649.5212512.9544
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003911
(v1.0)
Capza1NM_00979712340
1.103980.7989850.354680.8848611.53256
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
10.76514.324216.4636
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
10.507714.938611.3165
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
0.8110960.882321
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
10.771314.12812.4115
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
6.295419.193159.00398
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
0.8751961.00532
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003911
(v1.0)
Capza1NM_00979712340
12.480912.3499
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003911
(v1.0)
Capza1NM_00979712340
2.701195.26725
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003911
(v1.0)
5906H3012C03-3Mm.19142Cappa112340
U024467NAP096033-001TC918772P47753U,F,23.24563.32113.16293.14472.97653.14893.2932
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003911
(v1.0)
1452038_atMm.19142Capza1NM_009797.212340
521.2587.725832.4544.7251295.875
0003911
(v1.0)
1439455_x_atMm.19142Capza1NM_009797.212340
293.825187.375375.875318.2251001.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003911
(v1.0)
A_52_P401345Capza1NM_00979712340
11P1.0380.774P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003911
(v1.0)
Capza112340
743994