DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003980
GeneCbfa2t2
SynonymsCbfa2t2h
MTGR1
Desc.core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
LocusNM_009823 chr2:154262220-154365092(+)
NM_172860 chr2:154262220-154365092(+)
DB links


Entrez 12396
MGI 1333833
Ensembl ENSMUSG00000038533
Vega OTTMUSG00000015790
Featureprotein-coding
GO(BP)
  •   6 Terms
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of neuron projection development (GO:0010976)
      epithelial cell differentiation (GO:0030855)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      regulation of RNA biosynthetic process (GO:2001141)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003872
(v2.0)
Cbfa2t2NM_001285446,NM_009823,NM_17286012396
3.3958410.906212.952441.538617.918612.42539.681712.092616.640611.3726
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003980
(v1.0)
Cbfa2t212396
2-Cell Transient0.99843
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003872
(v2.0)
Cbfa2t212396
571/3630.1403413/3630.0698102/3631.7363231/3630.675546/363-0.9079281/363-0.965
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003872
(v2.0)
Cbfa2t212396
296/1630.346183/1630.050597/1632.7635219/1631.741810/163-1.867966/163-1.8798
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003872
(v2.0)
Cbfa2t212396
38.99839142.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003872
(v2.0)
Cbfa2t212396
13.87236322.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003980
(v1.0)
Cbfa2t2NM_009823,NM_17286012396
11.3378.9721330.888812.40856.80717
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003980
(v1.0)
Cbfa2t2FR176174,FR277603,FR311512,FR325074,FR404545,NM_009823,NM_17286012396
11.85118.4990333.491216.0718.6771
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003980
(v1.0)
Cbfa2t2NM_009823,NM_17286012396
11.57058.882048.96337
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003980
(v1.0)
Cbfa2t2FR176174,FR277603,FR311512,FR325074,FR404545,NM_009823,NM_17286012396
8.630058.19075
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003980
(v1.0)
Cbfa2t2NM_009823,NM_17286012396
28.598211.980911.4915
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003980
(v1.0)
Cbfa2t2FR176174,FR277603,FR311512,FR325074,FR404545,NM_009823,NM_17286012396
15.897514.7441
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003980
(v1.0)
Cbfa2t2NM_009823,NM_17286012396
8.2797813.677
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003980
(v1.0)
Cbfa2t2NM_009823,NM_17286012396
2.566372.71273
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003980
(v1.0)
1434757_atMm.29914Cbfa2t2NM_172860.2,NM_009823.112396
122.275165.6281.425235.75237.25
0003980
(v1.0)
1441615_atMm.29914Cbfa2t2NM_172860.2,NM_009823.112396
000125.75134.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003980
(v1.0)
A_52_P279712Cbfa2t2hNM_17286012396
11P1.2710.333P
0003980
(v1.0)
A_52_P632567Cbfa2t2hNM_17286012396
11P1.150.394P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003980
(v1.0)
Cbfa2t212396
001001