DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003998
GeneCbx2
SynonymsM33
Desc.chromobox 2
LocusNM_007623 chr11:118884343-118892584(+)
DB links


Entrez 12416
MGI 88289
Ensembl ENSMUSG00000025577
Vega OTTMUSG00000003981
Featureprotein-coding
GO(BP)
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      chromatin modification (GO:0016568)
      development of primary sexual characteristics (GO:0045137)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003890
(v2.0)
Cbx2NM_00762312416
0.67668957.42282.702137.227.595135.608164.19849102.77710.50875.19812
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003998
(v1.0)
Cbx212416
Minor ZGA0.92488
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003890
(v2.0)
Cbx212416
851/5310.1673452/531-0.347870/5310.6656220/5310.0598388/5311.59762066/5311.359
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003890
(v2.0)
Cbx212416
416/1840.6612207/1840.053458/1841.868175/1841.2476192/1842.0944976/1841.8022
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003890
(v2.0)
Cbx212416
123.999419663.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003890
(v2.0)
Cbx212416
24.98219227.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
59.722557.106327.68285.266982.9762
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
222.138160.349336.62918.665347.6582
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
62.44540.24747262.3043
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
60.952956.532976.1211
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
162.256188.563
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
62.48170.24408383.4871
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
25.635.085487.30727
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
300.082389.074
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003998
(v1.0)
Cbx2NM_00762312416
25.541513.6698
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003998
(v1.0)
Cbx2NM_00762312416
151.53593.8864
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003998
(v1.0)
5317NM_007623.1Mm.14547Cbx212416
U043249NAP017011-001Cbx2;TC843106P30658U,F,23.07363.02042.95662.94053.0762.98722.99
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003998
(v1.0)
1434116_atMm.14547Cbx2NM_007623.212416
331.225389.875287.0750118.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003998
(v1.0)
A_52_P13730Cbx2NM_00762312416
11P1.440.17P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003998
(v1.0)
Cbx212416
010030