DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004006
GeneCc2d1a
SynonymsFreud-1
Descriptioncoiled-coil and C2 domain containing 1A
LocusNM_145970 UCSC: chr8:86656727-86671652(-) OLP: chr8:86656727-86671652(-)
DB links


Entrez 212139
MGI 2384831
Ensembl ENSMUSG00000036686
Vega OTTMUSG00000030574
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      signal transduction (GO:0007165)
      positive regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043123)
GO_MF
  •   4 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      DNA binding (GO:0003677)
      signal transducer activity (GO:0004871)
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2003898 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
41.060732.20435.610384.040924.57941
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
42.93277.447835.1356
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
41.906631.88148.7181
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
42.95777.3457953.4323
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
5.194343.901676.29769
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004006
(v1.0)		Cc2d1aNM_145970212139
4.894216.1301
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004006
(v1.0)		Cc2d1aNM_145970212139
0.2375250.367669
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004006
(v1.0)		18332L0201C03-3Mm.41424MGC27560212139
U030024NAP007255-001MGC27560;TC8154543.09133.09123.09483.15273.53493.26663.3791
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004006
(v1.0)		1426422_atMm.41424Cc2d1aNM_145970.1212139
81.37566.760030.65
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0004006
(v1.0)		A_51_P121900BC016188NM_145970212139
11P0.8360.545P
Proteome N/A