DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004030
GeneCcdc115
SynonymsCcp1
Desc.coiled-coil domain containing 115
LocusNM_027159 chr1:34493515-34496517(-)
DB links


Entrez 69668
MGI 1916918
Ensembl ENSMUSG00000042111
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003920
(v2.0)
Ccdc115NM_02715969668
19.8493139.476123.17857.115541.922216.34536.76057141.65650.97321.3865
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004030
(v1.0)
Ccdc11569668
Maternal RNA0.97843
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003920
(v2.0)
Ccdc11569668
579/434-0.0967378/434-0.3147212/4342.5344455/4341.394344/434-1.2257195/434-1.7457
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003920
(v2.0)
Ccdc11569668
250/1640.0949175/164-0.0224166/1643.5242338/1642.35699/164-2.01449/164-2.307
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003920
(v2.0)
Ccdc11569668
74.030819637.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003920
(v2.0)
Ccdc11569668
14.32739614.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
145.00385.551242.518729.15754.75893
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
93.715444.081627.405920.35022.3703
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
151.6147.2590893.3382
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
147.9984.6922105.113
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
44.755744.0968
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
151.7027.15966115.284
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
39.365728.152735.3589
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
20.129224.9586
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004030
(v1.0)
Ccdc115NM_02715969668
179.92456.8077
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004030
(v1.0)
Ccdc115NM_02715969668
17.907621.248
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004030
(v1.0)
10856H3104E08-3Mm.72802310061I09Rik69668
U021217NAP099847-001TC942304Q9D6T3U,F,23.27173.32673.12083.25472.93512.96762.842
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004030
(v1.0)
1451265_atMm.379170Ccdc115NM_027159.269668
728.275773.975355.25202.95124.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004030
(v1.0)
A_52_P3191492310061I09RikNM_02715969668
11P0.5560.128P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004030
(v1.0)
Ccdc11569668
5466615