DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004044
GeneCcdc130
Synonyms
Desc.coiled-coil domain containing 130
LocusNM_026350 chr8:86781694-86794259(-)
DB links


Entrez 67736
MGI 1914986
Ensembl ENSMUSG00000004994
Vega OTTMUSG00000036549
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003933
(v2.0)
Ccdc130NM_02635067736
6.0482351.083811.66455.439835.740768.076084.9559216.48838.56868.58219
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004044
(v1.0)
Ccdc13067736
Maternal RNA0.99703
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003933
(v2.0)
Ccdc13067736
709/571-0.2001418/571-0.56567/5710.5008139/571-0.703161/571-1.1558534/571-0.6944
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003933
(v2.0)
Ccdc13067736
286/228-0.185162/228-0.605958/2281.576118/2280.377411/228-2.216277/228-2.1437
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003933
(v2.0)
Ccdc13067736
87.588413365.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003933
(v2.0)
Ccdc13067736
29.20427141.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
53.10278.088544.056443.979083.50218
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004044
(v1.0)
Ccdc130FR234558,NM_02635067736
180.07631.547616.077512.96669.15337
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
55.52382.21198.82477
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
54.19678.0073212.2569
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004044
(v1.0)
Ccdc130FR234558,NM_02635067736
37.259153.8303
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
55.55612.181613.443
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
3.755633.841965.95806
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004044
(v1.0)
Ccdc130FR234558,NM_02635067736
15.222922.0823
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004044
(v1.0)
Ccdc130NM_02635067736
20.80067.62294
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004044
(v1.0)
Ccdc130NM_02635067736
1.32490.854517
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004044
(v1.0)
13377J0030H08-3Mm.1978494930527D15Rik67736
U030033NAP006495-0014930527D15Rik;TC888927,TC795080Q922B53.8313.73063.69913.80523.93533.84453.8681
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004044
(v1.0)
1452523_a_atMm.30095Ccdc130NM_026350.267736
46.3250000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004044
(v1.0)
A_52_P4399324930527D15RikNM_02635067736
11P1.6370.145P
Proteome N/A