DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0004153

Gene

Ccdc86

Synonyms

cyclon
D19Ertd678e

Description

coiled-coil domain containing 86

Locus

NM_023731 UCSC: chr19:11015971-11023756(-) OLP: chr19:11015971-11023756(-)

DB links

Entrez 108673
MGI 1277220
Ensembl ENSMUSG00000024732
Vega OTTMUSG00000033058

Feature

protein-coding

GO_BP

GO_MF

GO_CC

2 Terms

KEGG

see DBTMEE:2004040 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	16.1503	4.93311	26.1497	23.3684	1.57423

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	16.8867	2.78735	5.38213

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	16.483	4.88358	7.65558

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	16.8965	2.74918	8.39638

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	24.2106	22.5631	15.4758

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0004153 (v1.0)	Ccdc86	NM_023731	108673	4.72225	15.8596

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0004153 (v1.0)	Ccdc86	NM_023731	108673	5.83208	9.14332

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0004153 (v1.0)	10670	H3101H11-3	Mm.24770	6720480F16Rik	108673	U038815	NAP073482-1	4933411H20Rik;	TC794306	Q9JJ89	U,F,2	2.8827	2.8444	3.172	3.5135	2.8742	3.1501	2.85
0004153 (v1.0)	13716	J0083E03-3	Mm.24770	6720480F16Rik	108673			6720480F16Rik				3.5947	3.4643	3.6339	3.4966	3.8033	3.6335	3.7083

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0004153 (v1.0)	1454197_a_at	Mm.294908	Ccdc86	NM_023731.3	108673	116.7	0	166.325	145.275	82.375
0004153 (v1.0)	1452414_s_at	Mm.294908	Ccdc86	NM_023731.3	108673	96.475	90.6	208.975	174.475	84.45

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0004153 (v1.0)	A_51_P108901	D19Ertd678e	NM_023731	108673	1	1	P	1.759	0.111	P

N/A