DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004206
GeneCcnc
Synonyms
Desc.cyclin C
LocusNM_016746 chr4:21654850-21677693(+)
NM_001122982 chr4:21654850-21675109(+)
DB links


Entrez 51813
MGI 1858199
Ensembl ENSMUSG00000028252
Vega OTTMUSG00000004717
Featureprotein-coding
GO(BP)
  •   4 Terms
      regulation of cyclin-dependent protein kinase activity (GO:0000079)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of cell cycle (GO:0051726)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004092
(v2.0)
CcncNM_001122982,NM_001290420,NM_001290422,NM_01674651813
5.7491817.77039.4294926.896928.196710.11778.17848.7478330.28219.22366
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004206
(v1.0)
Ccnc51813
Major ZGA0.94625
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004092
(v2.0)
Ccnc51813
548/3210.258414/3210.2501162/3212.5698359/3211.485467/321-0.1998544/3210.1612
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004092
(v2.0)
Ccnc51813
303/1550.4517232/1550.4631160/1553.5471340/1552.445615/155-1.256684/155-1.4666
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004092
(v2.0)
Ccnc51813
31.39799034.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004092
(v2.0)
Ccnc51813
11.88566119.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
18.45266.4821519.841220.12265.86128
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004206
(v1.0)
CcncFR150975,FR376843,NM_001122982,NM_01674651813
24.08858.2490636.706326.86269.00256
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
19.29381.849347.07216
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
18.83276.417066.48835
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004206
(v1.0)
CcncFR150975,FR376843,NM_001122982,NM_01674651813
131.018146.399
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
19.30511.824017.11621
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
18.369919.429221.2706
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004206
(v1.0)
CcncFR150975,FR376843,NM_001122982,NM_01674651813
167.44196.693
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
17.811216.5664
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004206
(v1.0)
CcncNM_001122982,NM_01674651813
4.259526.07742
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004206
(v1.0)
561C0117F09-3Mm.4300Ccnc51813
U004119NAP093200-001Ccnc;TC815517Q62447U,F,22.66252.71462.7073.09162.94252.94043.0716
0004206
(v1.0)
9418H3080H04-3Mm.4300Ccnc51813
U004119NAP001115-001Ccnc;TC815516Q62447U,F,23.10653.0163.0013.01413.04083.02383.0746
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004206
(v1.0)
1428570_atMm.278584CcncNM_016746.3,NM_001122982.151813
269.75189.3122.875155.193.725
0004206
(v1.0)
1454144_a_atMm.278584CcncNM_016746.3,NM_001122982.151813
18.450100.946.6250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004206
(v1.0)
A_51_P279363CcncNM_01674651813
11P1.0720.743P
Proteome N/A