DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004209
GeneCcnd3
Synonyms
Desc.cyclin D3
LocusNM_001081636 chr17:47642000-47736637(+)
NM_001081635 chr17:47642000-47736637(+)
NM_007632 chr17:47730416-47736637(+)
DB links


Entrez 12445
MGI 88315
Ensembl ENSMUSG00000034165
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004095
(v2.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
29.04386.549115.919612.555614.6526111.16933.186518.586523.9246101.62
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004209
(v1.0)
Ccnd312445
Minor ZGA0.97977
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004095
(v2.0)
Ccnd312445
595/446-0.0967312/446-0.6299266/4462.8221690/4461.954843/446-1.2971331/446-1.0262
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004095
(v2.0)
Ccnd312445
289/210-0.0519139/210-0.7072163/2103.1633431/2102.354735/210-0.5149283/210-0.1681
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004095
(v2.0)
Ccnd312445
62.99815540.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004095
(v2.0)
Ccnd312445
19.25725932.64
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
6.8115211.03339.341110.191223.5866
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
36.457557.614616.487716.1209120.369
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
7.1220710.621612.0375
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
6.9518410.922513.824
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
7.22210.852
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
7.1262110.476115.1617
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
8.64849.8399716.6172
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
7.2626913.7783
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
7.442582.1845
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004209
(v1.0)
Ccnd3NM_001081635,NM_001081636,NM_00763212445
11.845511.9199
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004209
(v1.0)
7066H3041D11-3Mm.7417Ccnd312445
U018061NAP096851-001Ccnd3;TC918877P30282U,F2.90642.8442.81572.92622.6943.00892.9868
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004209
(v1.0)
1415907_atMm.27291Ccnd3NM_001081636.1,NM_001081635.1,NM_007632.212445
0000220.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004209
(v1.0)
A_51_P238448Ccnd3NM_00763212445
11P0.9330.658P
Proteome N/A