DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004218
GeneCcnj
Synonyms
Desc.cyclin J
LocusNM_172839 chr19:40905769-40923060(+)
DB links


Entrez 240665
MGI 2443297
Ensembl ENSMUSG00000025010
Vega OTTMUSG00000028392
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004104
(v2.0)
CcnjNM_172839240665
1.4901112.936920.236317.904210.91542.76732.4139823.564412.00652.58948
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004218
(v1.0)
Ccnj240665
Minor ZGA0.99997
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004104
(v2.0)
Ccnj240665
788/4930.1635480/493-0.1544127/4931.6205256/4930.384181/493-0.5422667/493-0.1629
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004104
(v2.0)
Ccnj240665
414/1800.6858210/1800.1056116/1802.8855234/1801.695925/180-0.7666188/180-0.533
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004104
(v2.0)
Ccnj240665
90.138518947.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004104
(v2.0)
Ccnj240665
8.93461008.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004218
(v1.0)
CcnjNM_172839240665
13.449513.994313.32347.578451.73186
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004218
(v1.0)
CcnjFR170465,NM_172839240665
53.497441.029742.612125.11444.25318
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004218
(v1.0)
CcnjNM_172839240665
14.06260.5449515.268
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004218
(v1.0)
CcnjNM_172839240665
13.726513.853717.4388
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004218
(v1.0)
CcnjFR170465,NM_172839240665
33.556733.9921
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004218
(v1.0)
CcnjNM_172839240665
14.07080.53748619.1263
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004218
(v1.0)
CcnjNM_172839240665
12.33547.317298.29561
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004218
(v1.0)
CcnjFR170465,NM_172839240665
19.031721.0084
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004218
(v1.0)
CcnjNM_172839240665
4.820452.8983
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004218
(v1.0)
CcnjNM_172839240665
0.7820851.7337
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004218
(v1.0)
1455653_atMm.309CcnjNM_172839.4240665
40.17559.3558.600
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004218
(v1.0)
A_51_P418016CcnjNM_172839240665
11P0.8970.492P
Proteome N/A