DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004243
GeneCcrn4l
SynonymsCcr4
nocturnin
DescriptionCCR4 carbon catabolite repression 4-like (S. cerevisiae)
LocusNM_009834 UCSC: chr3:51028369-51055576(+) OLP: chr3:51028369-51055576(+)
DB links


Entrez 12457
MGI 109382
Ensembl ENSMUSG00000023087
Vega OTTMUSG00000027519
Featureprotein-coding
GO_BP
  •   3 Terms
      deadenylation-dependent decapping of nuclear-transcribed mRNA (GO:0000290)
      cytoplasmic mRNA processing body assembly (GO:0033962)
      rhythmic process (GO:0048511)
GO_MF
GO_CC
  •   1 Terms
KEGG
Ver2_FPKM see DBTMEE:2004129 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
131.49284.424529.76993.367045.28104
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
137.4870.75078292.1089
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
134.20183.576883.9549
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
137.5670.74049992.0789
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
27.56233.251025.63897
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004243
(v1.0)		Ccrn4lNM_00983412457
32.005446.2183
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004243
(v1.0)		Ccrn4lNM_00983412457
157.457199.952
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004243
(v1.0)		20557L0703H10-3Ccrn4l12457
3.09432.82382.70732.94543.62253.23673.5042
0004243
(v1.0)		22138L0943G09-3Mm.86541Ccrn4l12457
NAP056041-1Ccrn4lTC911657O357102.48362.64512.47882.54992.52322.47662.449
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004243
(v1.0)		1425837_a_atMm.86541Ccrn4lNM_009834.212457
1660.823647.681282.45448.075577.2
0004243
(v1.0)		1436362_x_atMm.86541Ccrn4lNM_009834.212457
1247.88143.6366.575375.625142.025
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0004243
(v1.0)		A_51_P189777Ccrn4lNM_00983412457
11P1.1150.473P
Proteome N/A