DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004369
GeneCdc40
SynonymsEHB3
PRP17
Desc.cell division cycle 40
LocusNM_027879 chr10:40551427-40602949(-)
DB links


Entrez 71713
MGI 1918963
Ensembl ENSMUSG00000038446
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004258
(v2.0)
Cdc40NM_02787971713
5.139212.090728.955724.698328.656816.29825.1013525.733223.19215.1814
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004369
(v1.0)
Cdc4071713
MGA0.9478
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004258
(v2.0)
Cdc4071713
620/3690.2352467/3690.223179/3692.5188403/3691.4522167/3690.9064527/369-0.0849
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004258
(v2.0)
Cdc4071713
395/1780.6343242/1780.3253178/1783.514387/1782.435266/1780.6148280/1780.0539
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004258
(v2.0)
Cdc4071713
67.505417937.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004258
(v2.0)
Cdc4071713
10.41291119.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
13.939222.218521.323223.27223.88944
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
74.9591129.529122.98108.42718.4354
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
14.57481.6584924.2409
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
14.226421.995421.8499
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
724.615530.432
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
14.58321.6357723.9642
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
19.74222.470220.5263
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
322.892320.076
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004369
(v1.0)
Cdc40NM_02787971713
21.076616.6544
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004369
(v1.0)
Cdc40NM_02787971713
4.704771.91347
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004369
(v1.0)
1453342_atMm.46063Cdc40NM_027879.171713
1192.31256713.9251041.8251030.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004369
(v1.0)
A_51_P294169Cdc40AK00456971713
11P1.0490.725P
Proteome N/A