DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004380
GeneCdc42se2
SynonymsSPEC2
Desc.CDC42 small effector 2
LocusNM_178626 chr11:54530917-54601205(-)
DB links


Entrez 72729
MGI 1919979
Ensembl ENSMUSG00000052298
Vega OTTMUSG00000005677
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004269
(v2.0)
Cdc42se2NM_17862672729
27.0802378.55753.416444.863110.88631.112821.97704.501122.73229.5652
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004380
(v1.0)
Cdc42se272729
Minor ZGA0.87807
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004269
(v2.0)
Cdc42se272729
714/4230.2419490/4230.0957192/4232.4282382/4231.179448/423-1.0661394/423-0.6997
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004269
(v2.0)
Cdc42se272729
388/1560.7978226/1560.4163181/1563.7154350/1562.478110/156-1.8062117/156-1.005
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004269
(v2.0)
Cdc42se272729
34.67029935.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004269
(v2.0)
Cdc42se272729
10.03467313.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
393.527521.168331.34776.888715.5717
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
874.4211108.24706.172165.39724.4513
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
411.4689.90352568.606
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
401.634515.935521.949
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
1109.21775.199
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
411.7089.76788572.456
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
306.77674.239185.0613
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
88.1546100.164
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004380
(v1.0)
Cdc42se2NM_17862672729
158.94865.719
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004380
(v1.0)
Cdc42se2NM_17862672729
311.506305.778
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004380
(v1.0)
8193H3061C09-3Mm.294762810404F18Rik72729
U032781NAP121961-001TC830809,TC820785U,F,23.46513.48533.46613.31553.39823.34263.3355
0004380
(v1.0)
8996H3075B10-3Mm.294762810404F18Rik72729
U032781NAP121961-001TC830809,TC820785U,F,24.38054.40323.64523.56882.37082.52782.8436
0004380
(v1.0)
15102J1036D09-3Mm.294762810404F18Rik72729
2.30072.31982.89932.7772.51312.29372.3139
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004380
(v1.0)
1435220_s_atMm.29476Cdc42se2NM_178626.372729
1116.352134.11634.22584.975182
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004380
(v1.0)
A_51_P340013Cdc42se2NM_17862672729
11P0.8970.474P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004380
(v1.0)
Cdc42se272729
222234