DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004387
GeneCdca3
SynonymsGrcc8
TOME-1
Desc.cell division cycle associated 3
LocusNM_013538 chr6:124780194-124783719(+)
DB links


Entrez 14793
MGI 1315198
Ensembl ENSMUSG00000023505
Vega OTTMUSG00000024338
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004276
(v2.0)
Cdca3NM_01353814793
13.190732.540556.665829.175134.9003148.88347.168245.65130.0439164.268
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004387
(v1.0)
Cdca314793
1-Cell Transient0.99525
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004276
(v2.0)
Cdca314793
722/570-0.1715382/570-0.692310/5702.6966761/5701.743832/570-2.0631202/570-2.0877
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004276
(v2.0)
Cdca314793
283/250-0.3324147/250-0.8775295/2503.7764672/2502.745516/250-1.844481/250-2.2043
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004276
(v2.0)
Cdca314793
102.686720749.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004276
(v2.0)
Cdca314793
27.235112621.62
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
33.823639.16721.709624.171433.7853
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
90.502997.725662.845553.240664.7999
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
35.36574.8239842.7321
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
34.520438.773833.8199
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
91.989775.6361
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
35.38624.7579137.0925
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
20.099723.338520.8093
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
52.164552.2964
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004387
(v1.0)
Cdca3NM_01353814793
13.127931.7592
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004387
(v1.0)
Cdca3NM_01353814793
79.9745106.565
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004387
(v1.0)
7171H3043F09-3Grcc814793
U007398NAP003796-001Grcc8;TC863566,TC863558O88837U,F,23.48123.27113.19153.20493.48713.5113.5757
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004387
(v1.0)
1452040_a_atMm.285723Cdca3NM_013538.514793
373.05839.725849.2355.15841.325
0004387
(v1.0)
1448000_atMm.285723Cdca3NM_013538.514793
27.6539.62534028.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004387
(v1.0)
A_51_P127195Cdca3NM_01353814793
11P0.9680.805P
0004387
(v1.0)
A_52_P628067Cdca3NM_01353814793
11P0.7610.223P
Proteome N/A