DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004388
GeneCdca4
SynonymsHepp
SEI-3
Desc.cell division cycle associated 4
LocusNM_028023 chr12:114058446-114067600(-)
DB links


Entrez 71963
MGI 1919213
Ensembl ENSMUSG00000047832
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004277
(v2.0)
Cdca4NM_02802371963
4.3286.7986141.55881.022647.035741.174925.7242124.9545.159750.7609
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004388
(v1.0)
Cdca471963
Minor ZGA0.90165
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004277
(v2.0)
Cdca471963
755/4750.1554446/475-0.2066454/4753.50261220/4752.685732/475-1.8022280/475-1.3571
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004277
(v2.0)
Cdca471963
392/1890.5373239/1890.2213421/1894.67011028/1893.7577/189-2.535958/189-2.274
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004277
(v2.0)
Cdca471963
66.142318036.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004277
(v2.0)
Cdca471963
22.515813316.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
90.234897.966460.331532.609418.352
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
108.162106.03567.46937.437721.1439
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
94.34881.57987106.883
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
92.093796.982792.7407
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
107.676104.15
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
94.40361.55823101.715
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
55.857631.485731.2878
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
37.033336.653
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004388
(v1.0)
Cdca4NM_02802371963
28.521826.6048
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004388
(v1.0)
Cdca4NM_02802371963
105.75975.114
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004388
(v1.0)
8809H3072D09-3Mm.285952410018C03Rik71963
U034391NAP096765-0012410018C03Rik;TC940692,TC940691Q921E8U,F,24.08933.89833.67353.57913.67243.49243.6911
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004388
(v1.0)
1423682_a_atMm.313185Cdca4NM_028023.371963
744.4751407.851606.95454.175310.3
0004388
(v1.0)
1456240_x_atMm.313185Cdca4NM_028023.371963
317.075655.675507.3224.875152.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004388
(v1.0)
A_51_P125691Cdca4NM_02802371963
11P0.5990.126P
Proteome N/A