DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004427
GeneCdk12
SynonymsCrk7
Crkrs
D11Ertd752e
Desc.cyclin-dependent kinase 12
LocusNM_001109626 chr11:98064619-98114854(+)
NM_026952 chr11:98064619-98108018(+)
NM_001109628 chr11:98064619-98114854(+)
DB links


Entrez 69131
MGI 1098802
Ensembl ENSMUSG00000003119
Vega OTTMUSG00000002637
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004316
(v2.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
4.5707758.1128114.83767.766378.65028.6957723.024112.42264.73178.3953
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004427
(v1.0)
Cdk1269131
1-Cell Transient0.9337
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004316
(v2.0)
Cdk1269131
733/3240.6634496/3240.4968332/3243.5876910/3242.811660/324-0.3697426/324-0.2038
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004316
(v2.0)
Cdk1269131
393/1361.0128215/1360.5412326/1364.7434810/1363.88096/136-2.265858/136-1.8022
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004316
(v2.0)
Cdk1269131
39.151817322.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004316
(v2.0)
Cdk1269131
11.58791428.16
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
60.40979.350550.410654.495916.2158
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
63.16311.6715886.5732
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
46.672352.61844.6945
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
65.086155.1771
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
102.84494.9298
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004427
(v1.0)
Cdk12NM_001109626,NM_001109628,NM_02695269131
2.076114.92091
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004427
(v1.0)
10218H3092G12-3Mm.314391810022J16Rik69131
U043220NAP002632-0011810022J16Rik;TC860027,TC860024,TC849269Q9CVL4U,F,23.45543.52083.34373.53122.84653.1522.97
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004427
(v1.0)
1455567_atMm.260516Cdk12NM_001109626.1,NM_001109628.1,NM_026952.269131
00521.42500
0004427
(v1.0)
1440858_atMm.260516Cdk12NM_001109626.1,NM_001109628.1,NM_026952.269131
00609.200
0004427
(v1.0)
1455964_atMm.260516Cdk12NM_001109626.1,NM_001109628.1,NM_026952.269131
000154.6204.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004427
(v1.0)
A_51_P488789Crk7AK04937669131
11P1.0580.673P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004427
(v1.0)
Crkrs69131
001001