DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004428
GeneCdk13
SynonymsCdc2l5
Desc.cyclin-dependent kinase 13
LocusNM_001081058 chr13:17807796-17896931(-)
NM_027118 chr13:17807796-17896931(-)
DB links


Entrez 69562
MGI 1916812
Ensembl ENSMUSG00000041297
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004317
(v2.0)
Cdk13NM_001081058,NM_02711869562
7.700317.957078.6960612.61746.117696.8296211.126610.07948.504227.33855
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004428
(v1.0)
Cdk1369562
Major ZGA0.96686
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004317
(v2.0)
Cdk1369562
883/3530.8082592/3530.6283315/3533.3926714/3532.339334/353-1.2934315/353-0.7608
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004317
(v2.0)
Cdk1369562
580/1411.5209344/1411.1649303/1414.5903613/1413.42832/141-3.5388140/141-0.6043
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004317
(v2.0)
Cdk1369562
28.927411924.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004317
(v2.0)
Cdk1369562
7.199927.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
8.269115.974679.363174.243727.85479
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
26.470318.097119.33138.8030921.5879
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
8.646122.815516.51849
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
8.439475.914687.46674
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
111.69334.0736
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
8.651142.776958.18926
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
8.668844.097485.88
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
18.850233.3399
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
7.4373312.0585
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004428
(v1.0)
Cdk13NM_001081058,NM_02711869562
3.12593.83072
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004428
(v1.0)
20349L0540D11-3Mm.21571Cdc2l569562
U034532NAP001715-002TC864607Q9D7B9U,F,23.34473.19632.9313.17033.57993.28893.4749
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004428
(v1.0)
1452897_atMm.193924Cdk13NM_001081058.2,NM_027118.169562
335.325321.9324.05225.8464.025
0004428
(v1.0)
1440833_atMm.193924Cdk13NM_001081058.2,NM_027118.169562
00899.47500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004428
(v1.0)
A_52_P199360Cdc2l5AK17326569562
11P1.9280.0963P
Proteome N/A