DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004444
GeneCdk5rap1
Synonyms
Desc.CDK5 regulatory subunit associated protein 1
LocusNM_025876 chr2:154161122-154198455(-)
DB links


Entrez 66971
MGI 1914221
Ensembl ENSMUSG00000027487
Vega OTTMUSG00000015918
Featureprotein-coding
GO(BP)
  •   5 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004333
(v2.0)
Cdk5rap1NM_02587666971
3.1601927.649510.628710.48017.878623.524335.0851210.91958.148322.7844
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004444
(v1.0)
Cdk5rap166971
Maternal RNA0.98878
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004333
(v2.0)
Cdk5rap166971
689/509-0.0758388/509-0.506673/5090.785194/509-0.0667/509-0.858509/509-0.5979
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004333
(v2.0)
Cdk5rap166971
265/1570.241135/157-0.331664/1572.2214171/1571.4411/157-1.689689/157-1.403
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004333
(v2.0)
Cdk5rap166971
74.561812957.8
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004333
(v2.0)
Cdk5rap166971
20.887229
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
28.74017.306017.790165.450993.55892
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
37.09598.949649.416696.913574.5619
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
30.05041.155717.97101
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
29.33227.232658.0958
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
9.0910110.0852
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
30.06791.139888.8792
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
7.212475.263155.63486
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
6.839018.13155
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004444
(v1.0)
Cdk5rap1NM_02587666971
1.642434.05412
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004444
(v1.0)
Cdk5rap1NM_02587666971
2.606250.855754
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004444
(v1.0)
1448626_atMm.289427Cdk5rap1NM_025876.266971
389.725122.25184.689.775103.775
Agilent44K N/A
Proteome N/A