DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004445
GeneCdk5rap2
Synonymsan
Desc.CDK5 regulatory subunit associated protein 2
LocusNM_145990 chr4:69884058-70071401(-)
DB links


Entrez 214444
MGI 2384875
Ensembl ENSMUSG00000039298
Vega OTTMUSG00000000307
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004334
(v2.0)
Cdk5rap2NM_145990214444
9.566818.83718.773644.63655.531354.3687810.26748.579966.603043.92749
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004445
(v1.0)
Cdk5rap2214444
Maternal RNA0.9657
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004334
(v2.0)
Cdk5rap2214444
648/483-0.0887503/483-0.057592/4831.1885228/4830.2471136/4830.2276729/483-0.0054
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004334
(v2.0)
Cdk5rap2214444
309/2000.1142222/2000.034290/2002.38189/2001.239230/200-0.6616146/200-1.0457
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004334
(v2.0)
Cdk5rap2214444
56.99910653.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004334
(v2.0)
Cdk5rap2214444
19.6646729.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
19.57686.085153.448593.832487.19435
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
398.829125.13171.037246.547690.5198
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
20.46933.498686.63903
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
19.98016.024056.35814
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
24.604830.0296
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
20.48123.450766.97339
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
3.192853.700414.58275
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
19.185810.5897
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004445
(v1.0)
Cdk5rap2NM_145990214444
8.705132.29636
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004445
(v1.0)
Cdk5rap2NM_145990214444
1.04690.67021
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004445
(v1.0)
3845C0903B04-3Mm.39965Cdk5rap2214444
NAP040250-1TC8894872.1652.52881.95252.27592.35972.16792.4162
0004445
(v1.0)
19457L0274C12-3Mm.39965Cdk5rap2214444
U025176NAP104666-12900018K03Rik;Cdk5rap2;MGC38528;TC904568Q9CUY5U,F,22.72332.77462.45072.45052.31082.42462.5524
MOE430 N/A
Agilent44K N/A
Proteome N/A