DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004450
GeneCdk9
SynonymsPITALRE
Desc.cyclin-dependent kinase 9 (CDC2-related kinase)
LocusNM_130860 chr2:32561302-32568304(-)
DB links


Entrez 107951
MGI 1328368
Ensembl ENSMUSG00000009555
Vega OTTMUSG00000012534
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004339
(v2.0)
Cdk9NM_130860107951
16.43313.199887.2844948.39139.204418.836912.46286.181334.744120.8725
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004450
(v1.0)
Cdk9107951
Major ZGA0.99022
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004339
(v2.0)
Cdk9107951
771/4600.2318385/460-0.3721176/4602.1856478/4601.381811/460-3.2157142/460-2.2829
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004339
(v2.0)
Cdk9107951
452/1890.7421222/1890.1154162/1893.2978425/1892.48476/189-2.728565/189-2.1136
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004339
(v2.0)
Cdk9107951
108.690218758.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004339
(v2.0)
Cdk9107951
21.94179523.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
3.326975.0648436.0427.21878.89258
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
7.718747.1960651.626854.484113.8835
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
3.478656.009775.52585
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
3.395515.013994.58175
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
3.650273.2926
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
3.480675.927465.0251
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
33.367526.280724.0674
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
58.544337.578
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004450
(v1.0)
Cdk9NM_130860107951
2.0824616.2504
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004450
(v1.0)
Cdk9NM_130860107951
5.585623.42453
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004450
(v1.0)
11747H3122D10-3Mm.27557Cdk9107951
U022507NAP098577-001Cdk9;TC875385Q99J95U,F,23.6133.86664.33364.12393.70664.03253.7473
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004450
(v1.0)
1417269_atMm.27557Cdk9NM_130860.3107951
00606.950305.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004450
(v1.0)
A_51_P190667Cdk9NM_130860107951
11P0.5980.122P
Proteome N/A