DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004472
GeneCdr2
Synonyms
Desc.cerebellar degeneration-related 2
LocusNM_007672 chr7:128100550-128125826(-)
DB links


Entrez 12585
MGI 1100885
Ensembl ENSMUSG00000030878
Vega OTTMUSG00000027358
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004361
(v2.0)
Cdr2NM_00767212585
7.25789109.356227.64107.87517.98210.29769.93976203.33927.99211.6662
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004472
(v1.0)
Cdr212585
Minor ZGA0.94524
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004361
(v2.0)
Cdr212585
761/4370.2869503/4370.0865425/4373.52481536/4373.1374255/4371.27261226/4370.8874
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004361
(v2.0)
Cdr212585
382/1860.5231217/1860.1056368/1864.49821159/1863.952694/1861.0565449/1860.6692
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004361
(v2.0)
Cdr212585
60.415316037.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004361
(v2.0)
Cdr212585
11.136510810.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
113.645157.95580.341212.467.0555
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
387.195498.61284.99345.328317.7538
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
118.8272.65429172.332
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
115.987156.369150.54
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
496.552503.251
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
118.8962.61793165.107
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
74.383412.030619.4095
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
51.528780.0418
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004472
(v1.0)
Cdr2NM_00767212585
153.825131.571
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004472
(v1.0)
Cdr2NM_00767212585
116.6246.7982
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004472
(v1.0)
1417430_atMm.1640Cdr2NM_007672.212585
950.2251205.11103.225057.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004472
(v1.0)
A_51_P294643Cdr2NM_00767212585
11P0.850.398P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004472
(v1.0)
Cdr212585
100100