DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004478
GeneCdt1
SynonymsRis2
Desc.chromatin licensing and DNA replication factor 1
LocusNM_026014 chr8:125091915-125097030(+)
DB links


Entrez 67177
MGI 1914427
Ensembl ENSMUSG00000006585
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004367
(v2.0)
Cdt1NM_02601467177
6.77158113.16459.670934.531644.205667.16096.1072976.362935.976352.5117
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004478
(v1.0)
Cdt167177
Maternal RNA0.98692
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004367
(v2.0)
Cdt167177
765/546-0.0262349/546-0.76101/5461.149279/5460.361231/546-2.0459248/546-1.7318
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004367
(v2.0)
Cdt167177
319/2180.0362157/218-0.586484/2182.1641222/2181.34743/218-3.737772/218-2.1742
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004367
(v2.0)
Cdt167177
111.116720354.74
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004367
(v2.0)
Cdt167177
24.59848030.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
117.71641.370225.712930.44314.25105
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
520.183140.38691.9282114.08618.9135
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
123.0832.4764445.1358
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
120.14140.954856.6458
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
114.283127.356
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
123.1542.4425262.1272
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
23.806229.394124.9068
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
123.27187.8421
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004478
(v1.0)
Cdt1NM_02601467177
17.529145.4865
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004478
(v1.0)
Cdt1NM_02601467177
95.61340.5862
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004478
(v1.0)
6300H3022F10-3Ris267177
U009914NAP001747-001Ris2;TC925107,TC925106Q9CYJ7U,F,24.47394.52284.15825.07494.79134.8194.6172
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004478
(v1.0)
1424143_a_atMm.21873Cdt1NM_026014.367177
2159.251837.9251829.852913.5751562.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004478
(v1.0)
A_51_P133612Ris2NM_02601467177
11P0.460.0813P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004478
(v1.0)
Cdt167177
010010