DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004483
GeneCdyl
Synonyms
Desc.chromodomain protein, Y chromosome-like
LocusNM_009881 chr13:35751731-35965933(+)
NM_001123386 chr13:35833271-35965933(+)
DB links


Entrez 12593
MGI 1339956
Ensembl ENSMUSG00000059288
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004372
(v2.0)
CdylNM_001123386,NM_00988112593
8.9408625.805138.994327.327218.535912.41397.7829737.255919.545813.9364
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004483
(v1.0)
Cdyl12593
Minor ZGA0.99736
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004372
(v2.0)
Cdyl12593
805/4210.4215512/4210.1658215/4212.5973855/4212.3465153/4210.5927873/4210.4519
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004372
(v2.0)
Cdyl12593
470/1800.8682248/1800.3444188/1803.5773600/1803.050661/1800.4871419/1800.6168
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004372
(v2.0)
Cdyl12593
64.1066894.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004372
(v2.0)
Cdyl12593
30.45473295.17
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
26.824827.008920.357712.86565.47913
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004483
(v1.0)
CdylFR183889,FR345833,NM_001123386,NM_00988112593
240.484281.135121.00992.045363.8954
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
28.04783.2697829.4673
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
27.377426.737727.5871
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004483
(v1.0)
CdylFR183889,FR345833,NM_001123386,NM_00988112593
226.133495.506
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
28.06413.2249930.2565
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
18.84812.422313.5458
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004483
(v1.0)
CdylFR183889,FR345833,NM_001123386,NM_00988112593
81.229242.4591
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
15.072624.211
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004483
(v1.0)
CdylNM_001123386,NM_00988112593
13.283115.5418
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004483
(v1.0)
2015C0281H03-3Mm.29002Cdyl12593
U014726NAP005451-001Cdyl;TC805309Q9WTK2U,F,23.78323.70583.48733.34412.87183.08792.9475
0004483
(v1.0)
5249AF081261.1Mm.29002Cdyl12593
U014726NAP005451-001Cdyl;TC805310,TC805309Q9WTK2U,F,22.66592.52752.55682.4882.86282.55112.7508
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004483
(v1.0)
1448935_atMm.29002CdylNM_001123386.1,NM_009881.312593
59.177.273.02553.738.075
Agilent44K N/A
Proteome N/A