DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004606
GeneCgn
Synonyms
Desc.cingulin
LocusNM_001037711 chr3:94563992-94590437(-)
DB links


Entrez 70737
MGI 1927237
Ensembl ENSMUSG00000068876
Vega OTTMUSG00000019660
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004518
(v2.0)
CgnNM_001037711,NM_00129372770737
4.352279.9977615.13267.265174.719173.813540.10438513.14875.786744.63856
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004606
(v1.0)
Cgn70737
Minor ZGA0.97262
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004518
(v2.0)
Cgn70737
632/448-0.0164394/448-0.300871/4480.9251285/4480.6757250/4481.20861498/4481.1404
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004518
(v2.0)
Cgn70737
294/2000.0428151/200-0.518560/2001.803202/2001.3347131/2001.4286720/2001.2445
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004518
(v2.0)
Cgn70737
49.610212440.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004518
(v2.0)
Cgn70737
14.25458516.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004606
(v1.0)
CgnNM_00103771170737
10.372810.48455.385143.261740.0733386
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004606
(v1.0)
CgnNM_00103771170737
141.583157.38268.903831.71280.488487
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
10.84571.5916611.4388
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
10.586510.37929.78212
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
140.799125.089
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
10.8521.5698610.7287
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
4.98583.149344.00469
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
4.578467.78324
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004606
(v1.0)
CgnNM_00103771170737
24.5291.11539
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004606
(v1.0)
CgnNM_00103771170737
15.178211.5629
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004606
(v1.0)
2140C0295C02-36330408J11Rik70737
U024342NAP011527-001CgnTC843396U,F,22.54512.83782.38772.62322.35232.60512.6422
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004606
(v1.0)
1435155_atMm.87634CgnNM_001037711.270737
699.825825.025348.775562.975944.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004606
(v1.0)
A_52_P414282CgnXM_13105270737
11P0.9490.753P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004606
(v1.0)
Cgn70737
5726112