DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004620
GeneChchd2
SynonymsEtohi6
Desc.coiled-coil-helix-coiled-coil-helix domain containing 2
LocusNM_024166 chr5:130357032-130363340(-)
DB links


Entrez 14004
MGI 1261428
Ensembl ENSMUSG00000070493
Vega OTTMUSG00000024020
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004533
(v2.0)
Chchd2NM_02416614004
140.42631.187413.049163.495288.0378194.69556.879610.65870.2173228.59
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004620
(v1.0)
Chchd214004
MGA0.95678
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004533
(v2.0)
Chchd214004
515/366-0.02356/366-0.155792/3661.5775249/3660.771560/366-0.5435587/3660.0819
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004533
(v2.0)
Chchd214004
272/1580.2693171/158-0.002184/1582.5999221/1581.799116/158-1.1961171/158-0.4817
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004533
(v2.0)
Chchd214004
63.357113746.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004533
(v2.0)
Chchd214004
18.23678621.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
32.4159.0274647.231361.114140.0308
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004620
(v1.0)
Chchd2FR397616,NM_02416614004
16.93743.8870619.637634.090718.414
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
33.892851.35529.84915
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
33.08288.936817.87199
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004620
(v1.0)
Chchd2FR397616,NM_02416614004
3.946263.76702
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
33.912550.65188.63373
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
43.728859.008148.642
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004620
(v1.0)
Chchd2FR397616,NM_02416614004
33.721530.5553
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004620
(v1.0)
Chchd2NM_02416614004
22.4683111.397
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004620
(v1.0)
Chchd2NM_02416614004
1.331671.22152
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004620
(v1.0)
5972H3014B02-3Mm.30133Etohi614004
U004180NAP092578-001TC924423,TC924417,TC924416,TC924415Q9D1L0U,F,23.59933.51244.29065.29255.08065.00974.9302
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004620
(v1.0)
1428161_a_atMm.299062Chchd214004
5491.553578.6756182.8259760.3255706.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004620
(v1.0)
A_52_P20354Chchd2NM_02416614004
11P0.3170.0717P
0004620
(v1.0)
A_52_P932898Chchd2NM_02416614004
11P0.3140.057P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004620
(v1.0)
Chchd214004
66319199