DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004633
GeneChd6
Synonyms
Desc.chromodomain helicase DNA binding protein 6
LocusNM_173368 chr2:160772714-160934792(-)
DB links


Entrez 71389
MGI 1918639
Ensembl ENSMUSG00000057133
Vega OTTMUSG00000001051
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004546
(v2.0)
Chd6NM_17336871389
3.8270618.979830.60584.061494.989586.828077.3892326.63426.452375.49003
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004633
(v1.0)
Chd671389
Minor ZGA0.98906
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004546
(v2.0)
Chd671389
647/466-0.0393436/466-0.211768/4660.8083183/466-0.0171127/4660.1808777/4660.138
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004546
(v2.0)
Chd671389
310/1650.3949192/1650.101860/1652.0631140/1651.082738/165-0.0591272/1650.1211
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004546
(v2.0)
Chd671389
48.764711143.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004546
(v2.0)
Chd671389
4.9074637.79
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004633
(v1.0)
Chd6NM_17336871389
19.727721.22343.021913.450075.12644
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004633
(v1.0)
Chd6FR248287,FR253825,NM_17336871389
147.586149.12114.85829.98828.8269
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004633
(v1.0)
Chd6NM_17336871389
20.62721.3995923.1551
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004633
(v1.0)
Chd6NM_17336871389
20.134121.010219.7263
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004633
(v1.0)
Chd6FR248287,FR253825,NM_17336871389
183.742217.302
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004633
(v1.0)
Chd6NM_17336871389
20.63911.3804221.6351
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004633
(v1.0)
Chd6NM_17336871389
2.797823.331184.48624
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004633
(v1.0)
Chd6FR248287,FR253825,NM_17336871389
62.392463.2625
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004633
(v1.0)
Chd6NM_17336871389
17.24591.97247
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004633
(v1.0)
Chd6NM_17336871389
1.568511.82225
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004633
(v1.0)
1427384_atMm.122738Chd6NM_173368.271389
242.275150.425118.267.67566.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004633
(v1.0)
A_52_P4769025430439G14RikNM_17336871389
11P1.7560.141P
Proteome N/A