DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004635
GeneChd8
SynonymsDuplin
Desc.chromodomain helicase DNA binding protein 8
LocusNM_201637 chr14:52817826-52857247(-)
DB links


Entrez 67772
MGI 1915022
Ensembl ENSMUSG00000053754
Vega OTTMUSG00000023392
Featureprotein-coding
GO(BP)
  •   14 Terms
      in utero embryonic development (GO:0001701)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      Wnt receptor signaling pathway (GO:0016055)
      chromatin modification (GO:0016568)
      negative regulation of Wnt receptor signaling pathway (GO:0030178)
      DNA duplex unwinding (GO:0032508)
      ATP-dependent chromatin remodeling (GO:0043044)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of transcription from RNA polymerase III promoter (GO:0045945)
      canonical Wnt receptor signaling pathway (GO:0060070)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004548
(v2.0)
Chd8NM_20163767772
9.1779420.498727.650623.989912.548610.019515.466527.597712.224110.4499
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004635
(v1.0)
Chd867772
Minor ZGA0.93876
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004548
(v2.0)
Chd867772
543/3760.0174399/376-0.030514/376-1.092520/376-2.84069/376-3.190858/376-3.2626
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004548
(v2.0)
Chd867772
245/1690.0228176/169-0.05737/169-0.899911/169-2.5061/169-4.378230/169-3.0308
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004548
(v2.0)
Chd867772
68.25767196.14
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004548
(v2.0)
Chd867772
21.5472393.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004635
(v1.0)
Chd8NM_20163767772
21.308419.212717.87168.7060310.7329
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004635
(v1.0)
Chd8NM_20163767772
225.404229.849232.07134.059123.942
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
22.27993.3564720.9615
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
21.747319.019820.3742
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
287.655272.957
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
22.29283.3104922.3458
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
16.54638.406028.44123
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
68.141455.5588
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004635
(v1.0)
Chd8NM_20163767772
43.362516.7085
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004635
(v1.0)
Chd8NM_20163767772
6.2262911.6059
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004635
(v1.0)
8501H3067C02-35830451P18Rik67772
U035535NAP000151-0025830451P18Rik;TC898822,TC898816,TC898812U,F,22.34282.50092.50522.52592.1822.3692.309
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004635
(v1.0)
1437297_atMm.289934Chd8NM_201637.267772
240.45495.725281.475146.05116.425
0004635
(v1.0)
1457580_atMm.289934Chd8NM_201637.267772
00111.100
0004635
(v1.0)
1457712_atMm.289934Chd8NM_201637.267772
00159.175136.7117.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004635
(v1.0)
A_51_P212630Chd8XM_61924467772
11P0.7180.186P
Proteome N/A