DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004638
GeneChek1
SynonymsChk1
Desc.checkpoint kinase 1
LocusNM_007691 chr9:36516067-36534243(-)
DB links


Entrez 12649
MGI 1202065
Ensembl ENSMUSG00000032113
Vega OTTMUSG00000037031
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004551
(v2.0)
Chek1NM_00769112649
0.343451163.254310.55453.365121.390220.03168.35818203.20827.190419.0151
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004638
(v1.0)
Chek112649
Minor ZGA0.99856
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004551
(v2.0)
Chek112649
583/3340.29492/3340.4415228/3343.0051619/3342.212919/334-2.0219157/334-1.6789
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004551
(v2.0)
Chek112649
283/1600.3082206/1600.247224/1603.9875595/1603.2068/160-2.131389/160-1.4302
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004551
(v2.0)
Chek112649
31.04519931.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004551
(v2.0)
Chek112649
9.5217612.53
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004638
(v1.0)
Chek1NM_00769112649
169.66214.29239.762114.83915.93955
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004638
(v1.0)
Chek1NM_00769112649
1838.062457.92460.85179.12564.3239
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
177.3950.125604233.797
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
173.155212.14150.248
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
3231.243027.58
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
177.4980.123883164.787
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
36.813514.327818.8662
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
116.39148.252
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004638
(v1.0)
Chek1NM_00769112649
92.892333.1909
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004638
(v1.0)
Chek1NM_00769112649
62.4023124.006
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004638
(v1.0)
7102H3042B08-3Mm.16753Chek112649
U010251NAP123981-1Chek1;O35280U,F,22.97382.94652.79982.62422.70622.78812.69
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004638
(v1.0)
1450677_atMm.16753Chek1NM_007691.512649
1206.8252058.825441.575217.7200.15
0004638
(v1.0)
1420031_atMm.16753Chek1NM_007691.512649
92.67594.125000
0004638
(v1.0)
1439208_atMm.16753Chek1NM_007691.512649
2177.051676.425000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0004638
(v1.0)
A_51_P326499Chek1NM_00769112649
11P0.5130.0945P
0004638
(v1.0)
A_51_P326502Chek1NM_00769112649
11P0.6830.164P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0004638
(v1.0)
Chek112649
031032