DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004715
GeneChsy1
Synonyms
Descriptionchondroitin sulfate synthase 1
LocusNM_001081163 UCSC: chr7:73254401-73318684(+) OLP: chr7:73254401-73318684(+)
DB links


Entrez 269941
MGI 2681120
Ensembl ENSMUSG00000032640
Vega OTTMUSG00000029829
Featureprotein-coding
GO_BP
  •   2 Terms
      chondroitin sulfate biosynthetic process (GO:0030206)
      negative regulation of ossification (GO:0030279)
GO_MF
  •   5 Terms
      transferase activity (GO:0016740)
      transferase activity, transferring hexosyl groups (GO:0016758)
      metal ion binding (GO:0046872)
      glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (GO:0047238)
      N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (GO:0050510)
GO_CC
KEGG
  •   2 Terms
      Glycosaminoglycan biosynthesis - chondroitin sulfate (mmu00532)
      Metabolic pathways (mmu01100)
Ver2_FPKM see DBTMEE:2004631 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
151.991106.89425.52955.42478.43334
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
158.9211.16584116.623
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
155.123105.82142.832
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
159.0131.14988156.653
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
23.63645.237779.70421
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004715
(v1.0)		Chsy1NM_001081163269941
149.18426.7924
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004715
(v1.0)		Chsy1NM_001081163269941
32.593944.5387
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004715
(v1.0)		1434316_atMm.333916Chsy1NM_001081163.1269941
4653.426605.982301.88110.625121.875
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0004715
(v1.0)		A_52_P436364Chsy1AK129255269941
11P1.0320.807P
Proteome N/A