DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0004720
GeneChuk
SynonymsChuk1
IkappaB kinase alpha
IKK 1
IKK alpha
IKK-1
IKK-alpha
IKK[a]
IKK1
IKKalpha
Desc.conserved helix-loop-helix ubiquitous kinase
LocusNM_007700 chr19:44147824-44181967(-)
NM_001162410 chr19:44147824-44181967(-)
DB links


Entrez 12675
MGI 99484
Ensembl ENSMUSG00000025199
Vega OTTMUSG00000029724
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004636
(v2.0)
ChukNM_001162410,NM_00770012675
6.962546.101115.5480820.152715.49339.4808315.12094.195115.59559.17157
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0004720
(v1.0)
Chuk12675
Major ZGA0.98649
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004636
(v2.0)
Chuk12675
679/4470.0901452/447-0.099979/4471.0802209/4470.233323/447-2.174895/447-2.814
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2004636
(v2.0)
Chuk12675
304/1780.258186/178-0.052576/1782.297195/1781.4511/178-1.866345/178-2.5435
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004636
(v2.0)
Chuk12675
81.917614755.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2004636
(v2.0)
Chuk12675
17.03947921.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
6.340453.831314.994510.754510.64
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
19.316315.459358.134744.170335.7566
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
6.629532.546294.18003
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
6.471073.792833.11048
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
4.424163.54711
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
6.633382.511413.41147
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
13.882610.383910.7751
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
57.525451.0261
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
2.489528.65209
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0004720
(v1.0)
ChukNM_001162410,NM_00770012675
0.2553171.15271
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004720
(v1.0)
4687C0948D12-3Mm.3996Chuk12675
U039070NAP033014-1Chuk;TC849106Q60680U,F,21.80682.34852.61132.87642.35522.7342.6733
0004720
(v1.0)
11975H3130B08-3Mm.3996Chuk12675
U039070NAP009615-001Chuk;TC793937Q60680U,F,23.27923.24333.30933.28123.30553.2223.2381
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0004720
(v1.0)
1417091_atMm.3996ChukNM_007700.2,NM_001162410.112675
0080.2043.625
0004720
(v1.0)
1451383_a_atMm.3996ChukNM_007700.2,NM_001162410.112675
0044.2028.825
0004720
(v1.0)
1428210_s_atMm.3996ChukNM_007700.2,NM_001162410.112675
187.175103.2425.375243.575302.075
Agilent44K N/A
Proteome N/A